Systematically incorporating validated biological knowledge: an efficient hidden Markov model framework for segmenting tiling array data in transcriptional and ChIP-chip experiments
Jiang Du, Joel S. Rozowsky, Jan O. Korbel, Zhengdong D. Zhang, Thomas E. Royce, Martin H. Schultz, Michael Snyder and Mark Gerstein
(2006) Bioinformatics, 22(24), 3016-3024.
Free Full Text | PMID: 17038339

Supplementary material

Supplementary documents
Supplementary figures

Links to raw data
Placenta transcriptional data
STAT1 ChIP-chip data

Results on transcriptional data using full training data
Discrete 4-state HMM results
Continuous 4-state HMM results

Results on ChIP-chip data using full training data
Continuous 2-state HMM results

Jiang Du
Last modified: Tue Dec 24 20:07:32 EST 2006